Assay name
MM_HDAC9_2058073 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Hdac9
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Hdac9
Species
Mus musculus
Main target
ENSMUST00000209902
Exons numbers
1-2
Ensembl exons ids
ENSMUSE00001385196;ENSMUSE00001383828
Amplicon start
30
Amplicon length
71
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000110819
Protein coding
CCDS36432
NM_024124
Chr.12: 34371497 - 34528874
ENSMUST00000209463
Protein coding
Chr.12: 34433145 - 34618493
ENSMUST00000209667
Protein coding
Chr.12: 34373827 - 34528304
ENSMUST00000209750
Protein coding
NM_001271386
Chr.12: 34052301 - 34528304
ENSMUST00000209902
Protein coding
Chr.12: 34047580 - 34528328
ENSMUST00000209990
Protein coding
Chr.12: 34052301 - 34528304
ENSMUST00000210724
Protein coding
Chr.12: 34095881 - 34528304
ENSMUST00000211632
Retained intron
Chr.12: 34434313 - 34906979
ENSMUST00000211752
Nonsense mediated decay
Chr.12: 34095877 - 34917095