Assay name
HS_HLA-C_1496599 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for HLA-C
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
HLA-C
Species
Homo sapiens
Main target
ENST00000383483
Exons numbers
2-3
Ensembl exons ids
ENSE00003602980;ENSE00001789726
Amplicon start
326
Amplicon length
116
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000383483
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31262172 - 31265499
ENST00000383487
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31262172 - 31265499
ENST00000400341
Protein coding
NM_002117
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31262172 - 31265564
ENST00000449884
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31263631 - 31265482
ENST00000458668
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31262172 - 31265503
ENST00000461470
Retained intron
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31262172 - 31265462
ENST00000461937
Nonsense mediated decay
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31263627 - 31265486
ENST00000464623
Retained intron
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31264516 - 31265503
ENST00000470176
Retained intron
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31263638 - 31265543
ENST00000485321
Nonsense mediated decay
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31262172 - 31265518