Assay name
HS_CSNK1A1_1575199 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for CSNK1A1
Best transcript assay for ENST00000377843
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000377843
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
CSNK1A1
Gene aliases
CK1;CK1a;CK1alpha;CKIa;CKIalpha
Species
Homo sapiens
Main target
ENST00000377843
Exons numbers
2-3
Ensembl exons ids
ENSE00001033077;ENSE00000767015
Amplicon start
716
Amplicon length
130
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000261798
Protein coding
CCDS64291
NM_001271741
Chr.5: 149492197 - 149551397
ENST00000377843
Protein coding
CCDS47303
NM_001892
Chr.5: 149495896 - 149551552
ENST00000504676
Protein coding
Chr.5: 149496054 - 149550299
ENST00000515435
Protein coding
NM_001271742
Chr.5: 149496054 - 149550299
ENST00000515768
Protein coding
CCDS47304
NM_001025105
Chr.5: 149496853 - 149550964
ENST00000523203
Nonsense mediated decay
Chr.5: 149525135 - 149551356