Assay name
HS_WIPI1_1762082 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for WIPI1
Best transcript assay for ENST00000586815
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000586815
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
WIPI1
Gene aliases
FLJ10055;WIPI49;ATG18;ATG18A
Species
Homo sapiens
Main target
ENST00000586815
Exons numbers
4-5
Ensembl exons ids
ENSE00003670587;ENSE00003466976
Amplicon start
465
Amplicon length
100
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000262139
Protein coding
CCDS11677
NM_017983
Chr.17: 68421281 - 68457496
ENST00000546360
Protein coding
CCDS82193
NM_001320772
Chr.17: 68421514 - 68457479
ENST00000586815
Processed transcript
Chr.17: 68433509 - 68457513
ENST00000589316
Nonsense mediated decay
Chr.17: 68421310 - 68457499
ENST00000589459
Processed transcript
Chr.17: 68421309 - 68457499
ENST00000591494
Processed transcript
Chr.17: 68428877 - 68448440