Assay name
HS_DDX3X_2474767 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for DDX3X
Best transcript assay for ENST00000644513
Assay targets 36 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000644513
Assay targets 36 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
DDX3X
Gene aliases
DBX;HLP2;DDX14;CAP-Rf;DDX3
Species
Homo sapiens
Main target
ENST00000644513
Exons numbers
1-2
Ensembl exons ids
ENSE00003823838;ENSE00003656386
Amplicon start
86
Amplicon length
85
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000399959
Protein coding
Chr.X: 41334162 - 41350274
ENST00000441189
Protein coding
Chr.X: 41334162 - 41349860
ENST00000457138
Protein coding
CCDS55404
NM_001193417
Chr.X: 41333913 - 41350224
ENST00000478993
Nonsense mediated decay
CCDS43931
Chr.X: 41333398 - 41364472
ENST00000480592
Retained intron
Chr.X: 41334162 - 41339604
ENST00000615742
Nonsense mediated decay
Chr.X: 41334162 - 41342506
ENST00000625837
Protein coding
Chr.X: 41333348 - 41364472
ENST00000626301
Protein coding
Chr.X: 41333348 - 41364472
ENST00000629496
Protein coding
CCDS43931
Chr.X: 41333348 - 41350287
ENST00000629785
Nonsense mediated decay
CCDS43931
Chr.X: 41333348 - 41364472
ENST00000630255
Nonsense mediated decay
CCDS43931
Chr.X: 41333348 - 41364472
ENST00000630370
Nonsense mediated decay
Chr.X: 41333348 - 41364472
ENST00000630858
Nonsense mediated decay
Chr.X: 41333348 - 41364472
ENST00000631641
Retained intron
Chr.X: 41334162 - 41344531
ENST00000642597
Retained intron
Chr.X: 41334162 - 41349886
ENST00000642722
Retained intron
Chr.X: 41334162 - 41349886
ENST00000642793
Nonsense mediated decay
Chr.X: 41334162 - 41350243
ENST00000643821
Protein coding
Chr.X: 41334012 - 41338780
ENST00000643963
Nonsense mediated decay
Chr.X: 41334164 - 41350247
ENST00000644074
Protein coding
Chr.X: 41334162 - 41350265
ENST00000644109
Protein coding
Chr.X: 41334162 - 41349886
ENST00000644307
Retained intron
Chr.X: 41334162 - 41350168
ENST00000644513
Protein coding
Chr.X: 41334162 - 41349884
ENST00000644876
Protein coding
CCDS43931
NM_001356
Chr.X: 41333284 - 41351668
ENST00000644958
Retained intron
Chr.X: 41334162 - 41349886
ENST00000645080
Nonsense mediated decay
NM_001363819
Chr.X: 41334162 - 41349891
ENST00000645338
Retained intron
Chr.X: 41334162 - 41350258
ENST00000645561
Retained intron
Chr.X: 41334162 - 41349897
ENST00000645589
Nonsense mediated decay
Chr.X: 41334162 - 41349867
ENST00000645783
Nonsense mediated decay
Chr.X: 41334245 - 41341543
ENST00000646122
Protein coding
Chr.X: 41334162 - 41349886
ENST00000646196
Retained intron
Chr.X: 41334162 - 41350254
ENST00000646223
Nonsense mediated decay
Chr.X: 41334164 - 41351668
ENST00000646319
Protein coding
CCDS87734
NM_001193416
Chr.X: 41334175 - 41350209
ENST00000646822
Retained intron
Chr.X: 41334162 - 41349739
ENST00000646940
Retained intron
Chr.X: 41334162 - 41350205