Assay name
MM_SOX17_2006354 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Sox17
Assay targets 8 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Assay targets 8 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Gene symbol
Sox17
Species
Mus musculus
Main target
ENSMUST00000027035
Exons numbers
4
Ensembl exons ids
ENSMUSE00000231976
Amplicon start
1407
Amplicon length
89
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000027035
Protein coding
CCDS14805
NM_011441
Chr.1: 4490931 - 4496413
ENSMUST00000116652
Protein coding
CCDS14805
NM_001289464
Chr.1: 4491713 - 4496363
ENSMUST00000191647
Protein coding
Chr.1: 4492458 - 4496330
ENSMUST00000191939
Protein coding
Chr.1: 4492465 - 4493735
ENSMUST00000192505
Retained intron
Chr.1: 4492457 - 4493604
ENSMUST00000192650
Protein coding
CCDS78539
NM_001289466;NM_001289465
Chr.1: 4491390 - 4497354
ENSMUST00000192913
Protein coding
Chr.1: 4492467 - 4496396
ENSMUST00000195555
Protein coding
CCDS78538
NM_001289467
Chr.1: 4491250 - 4496757