Assay name
HS_CALD1_1658178 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for CALD1
Best transcript assay for ENST00000361901
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000361901
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
CALD1
Gene aliases
CDM;H-CAD;L-CAD;h-CD
Species
Homo sapiens
Main target
ENST00000361901
Exons numbers
1-2
Ensembl exons ids
ENSE00001906921;ENSE00001141359
Amplicon start
10
Amplicon length
82
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000361675
Protein coding
CCDS5835
NM_033138
Chr.7: 134779634 - 134970729
ENST00000361901
Protein coding
CCDS5834
NM_004342
Chr.7: 134779678 - 134970641
ENST00000422748
Protein coding
CCDS5836
NM_033157
Chr.7: 134779420 - 134968859
ENST00000430085
Nonsense mediated decay
Chr.7: 134779637 - 134968653
ENST00000454108
Protein coding
Chr.7: 134779625 - 134928900
ENST00000475772
Retained intron
Chr.7: 134779634 - 134868241
ENST00000482470
Retained intron
Chr.7: 134779650 - 134962389