Assay name​
HS_ARID1B_1761000 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for ARID1B
Assay targets 15 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 15 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
ARID1B
Gene aliases​
KIAA1235;ELD/OSA1;p250R;BAF250b;DAN15;6A3-5;SMARCF2
Species​
Homo sapiens
Main target​
ENST00000637015
Exons numbers​
13-14
Ensembl exons ids​
ENSE00001142049;ENSE00003800863
Amplicon start​
2719
Amplicon length​
94
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000346085
Protein coding
Chr.6: 156776020 - 157210779
ENST00000350026
Protein coding
CCDS5251
NM_017519
Chr.6: 156777930 - 157209142
ENST00000414678
Protein coding
Chr.6: 156779433 - 157209142
ENST00000635849
Protein coding
Chr.6: 157022286 - 157208694
ENST00000635957
Protein coding
Chr.6: 157148908 - 157207868
ENST00000636227
Retained intron
Chr.6: 157193471 - 157208695
ENST00000636254
Retained intron
Chr.6: 157198509 - 157208700
ENST00000636930
Protein coding
CCDS87459
NM_001346813
Chr.6: 156777930 - 157209267
ENST00000636940
Retained intron
Chr.6: 157172776 - 157208685
ENST00000637015
Protein coding
Chr.6: 157148624 - 157208688
ENST00000637568
Nonsense mediated decay
Chr.6: 157148820 - 157208100
ENST00000637741
Processed transcript
Chr.6: 157170050 - 157208021
ENST00000637810
Protein coding
Chr.6: 157084772 - 157208361
ENST00000637904
Protein coding
CCDS87460
Chr.6: 157036315 - 157208683
ENST00000647938
Protein coding
CCDS55072
NM_020732
Chr.6: 156777930 - 157210777