Assay name
MM_CLIP1_2262058 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Clip1
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Clip1
Species
Mus musculus
Main target
ENSMUST00000137363
Exons numbers
15-16
Ensembl exons ids
ENSMUSE00001228481;ENSMUSE00001010694
Amplicon start
2399
Amplicon length
108
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000031382
Protein coding
Chr.5: 123579244 - 123656018
ENSMUST00000063905
Protein coding
CCDS84958
Chr.5: 123578833 - 123684325
ENSMUST00000111561
Protein coding
Chr.5: 123577807 - 123684275
ENSMUST00000111564
Protein coding
CCDS71663
NM_001291229
Chr.5: 123577795 - 123684322
ENSMUST00000111566
Protein coding
CCDS19667
NM_019765
Chr.5: 123577795 - 123684618
ENSMUST00000125340
Retained intron
Chr.5: 123577818 - 123603810
ENSMUST00000133545
Retained intron
Chr.5: 123586187 - 123617463
ENSMUST00000137363
Protein coding
Chr.5: 123577807 - 123647877
ENSMUST00000137602
Retained intron
Chr.5: 123579074 - 123612172
ENSMUST00000154432
Retained intron
Chr.5: 123590069 - 123603719
ENSMUST00000154672
Protein coding
Chr.5: 123579451 - 123617822