Assay name
HS_PTPN20_675406 QuantiNova LNA Probe PCR Assay
Assay specification
Best coverage assay for PTPN20
Assay targets 25 transcripts
Assay spans exon
Assay targets 25 transcripts
Assay spans exon
Gene symbol
PTPN20
Gene aliases
bA42B19.1;DKFZP566K0524;bA142I17.1;CT126;PTPN20A;PTPN20B
Species
Homo sapiens
Main target
ENST00000374218
Exons numbers
9-10
Ensembl exons ids
ENSE00003748210;ENSE00003598768
Amplicon start
1191
Amplicon length
84
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000374218
Protein coding
CCDS73114
NM_001352543;NM_001042363;NM_001352552
Chr.10: 46911438 - 47002320
ENST00000374339
Protein coding
CCDS73110
NM_001042357;NM_001352521;NM_001320685
Chr.10: 46932423 - 47000789
ENST00000374342
Protein coding
CCDS73116
NM_001352555;NM_001042365;NM_001352551
Chr.10: 46911396 - 47002322
ENST00000374346
Protein coding
CCDS73111
NM_015605;NM_001352523
Chr.10: 46911435 - 47002320
ENST00000395721
Protein coding
CCDS73114
NM_001320681;NM_001352522;NM_001352553;NM_001352554
Chr.10: 46911438 - 47002322
ENST00000395722
Protein coding
CCDS73116
NM_001352547;NM_001352549;NM_001320682
Chr.10: 46911428 - 47002322
ENST00000395725
Protein coding
CCDS73115
NM_001042364;NM_001352532
Chr.10: 46911438 - 47002320
ENST00000395727
Protein coding
CCDS73109
NM_001352527;NM_001352528;NM_001352529;NM_001352525;NM_001352530;NM_001352526;NM_001320691;NM_001042360
Chr.10: 46911781 - 47000789
ENST00000437863
Nonsense mediated decay
Chr.10: 46940582 - 47002488
ENST00000502254
Protein coding
CCDS86087
NM_001352542;NM_001352535;NM_001352531;NM_001352541
Chr.10: 46932417 - 47000788
ENST00000502705
Protein coding
CCDS81454
NM_001352534;NM_001320684
Chr.10: 46911781 - 47000789
ENST00000503851
Protein coding
CCDS73108
NM_001042362
Chr.10: 46911781 - 47000789
ENST00000505814
Protein coding
CCDS73114
NM_001320686
Chr.10: 46911781 - 47000789
ENST00000506080
Protein coding
CCDS73114
Chr.10: 46911781 - 47000789
ENST00000508602
Protein coding
CCDS73115
Chr.10: 46932423 - 47000789
ENST00000508715
Protein coding
CCDS73116
NM_001320689
Chr.10: 46911781 - 47000789
ENST00000509599
Protein coding
CCDS73111
NM_001320683
Chr.10: 46911781 - 47000789
ENST00000509774
Protein coding
CCDS73106
NM_001042361;NM_001352524
Chr.10: 46911781 - 47000789
ENST00000509900
Protein coding
CCDS73115
NM_001352533
Chr.10: 46911781 - 47000789
ENST00000510335
Nonsense mediated decay
Chr.10: 46911781 - 47000789
ENST00000511769
Protein coding
CCDS73105
NM_001042358
Chr.10: 46911781 - 47000789
ENST00000513156
Protein coding
CCDS73107
NM_001042359
Chr.10: 46911781 - 47000789
ENST00000513159
Protein coding
CCDS73116
NM_001352550;NM_001320690
Chr.10: 46911781 - 47000789
ENST00000513266
Protein coding
CCDS81456
NM_001352537;NM_001352538;NM_001352536;NM_001320688;NM_001352539
Chr.10: 46911781 - 47000789
ENST00000513756
Protein coding
CCDS73116
NM_001352548
Chr.10: 46932417 - 47000788