Assay name
HS_HCLS1_1394102 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for HCLS1
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
HCLS1
Gene aliases
HS1;CTTNL
Species
Homo sapiens
Main target
ENST00000491824
Exons numbers
1-2
Ensembl exons ids
ENSE00001908570;ENSE00003475311
Amplicon start
72
Amplicon length
67
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000314583
Protein coding
CCDS3003
NM_005335
Chr.3: 121631399 - 121660903
ENST00000428394
Protein coding
CCDS77800
NM_001292041
Chr.3: 121631715 - 121660898
ENST00000464274
Nonsense mediated decay
Chr.3: 121637146 - 121660883
ENST00000468693
Processed transcript
Chr.3: 121656059 - 121660878
ENST00000479994
Retained intron
Chr.3: 121657982 - 121660903
ENST00000481314
Retained intron
Chr.3: 121644230 - 121660901
ENST00000487290
Processed transcript
Chr.3: 121644121 - 121660898
ENST00000488033
Processed transcript
Chr.3: 121653565 - 121660916
ENST00000491824
Retained intron
Chr.3: 121656891 - 121660919
ENST00000495491
Nonsense mediated decay
Chr.3: 121632406 - 121660927