Assay name
HS_PTPRO_1396667 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for PTPRO
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
PTPRO
Gene aliases
PTPU2;GLEPP1;PTP-U2;PTP-oc;NPHS6
Species
Homo sapiens
Main target
ENST00000538907
Exons numbers
2-3
Ensembl exons ids
ENSE00003675504;ENSE00003680447
Amplicon start
320
Amplicon length
88
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000281171
Protein coding
CCDS8675
NM_030667
Chr.12: 15322508 - 15598331
ENST00000348962
Protein coding
CCDS8674
NM_002848
Chr.12: 15322553 - 15597393
ENST00000442921
Protein coding
CCDS44837
NM_030669
Chr.12: 15546352 - 15597399
ENST00000445537
Protein coding
CCDS44837
NM_030671
Chr.12: 15546352 - 15597399
ENST00000535311
Nonsense mediated decay
Chr.12: 15546618 - 15580069
ENST00000538907
Retained intron
Chr.12: 15565349 - 15580746
ENST00000542557
Protein coding
CCDS53754
NM_030668
Chr.12: 15546352 - 15597399
ENST00000544244
Protein coding
CCDS53754
NM_030670
Chr.12: 15546352 - 15597399