Assay name​
MM_CLCN5_1947715 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for Clcn5
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
Clcn5
Species​
Mus musculus
Main target​
ENSMUST00000115746
Exons numbers​
6-7
Ensembl exons ids​
ENSMUSE00001254387;ENSMUSE00001305146
Amplicon start​
691
Amplicon length​
78
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000004428
Protein coding
CCDS29963
NM_016691
Chr.X: 7153810 - 7188714
ENSMUST00000115746
Protein coding
CCDS57727
NM_001243762
Chr.X: 7159469 - 7319233
ENSMUST00000128319
Protein coding
Chr.X: 7171199 - 7319358
ENSMUST00000154382
Retained intron
Chr.X: 7160177 - 7188673