Assay name
HS_ERBB2_1299797 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for ERBB2
Best transcript assay for ENST00000269571
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000269571
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
ERBB2
Gene aliases
NEU;HER-2;CD340;HER2;c-ERB2;c-ERB-2;NGL
Species
Homo sapiens
Main target
ENST00000269571
Exons numbers
3-4
Ensembl exons ids
ENSE00003653182;ENSE00003648452
Amplicon start
585
Amplicon length
106
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000269571
Protein coding
CCDS32642
NM_004448
Chr.17: 39700080 - 39728662
ENST00000406381
Protein coding
CCDS45667
Chr.17: 39694931 - 39728662
ENST00000541774
Protein coding
CCDS74052
NM_001289936
Chr.17: 39699560 - 39728662
ENST00000578199
Protein coding
CCDS77017
NM_001289938
Chr.17: 39688119 - 39717657
ENST00000578373
Nonsense mediated decay
Chr.17: 39700080 - 39728577
ENST00000583038
Retained intron
Chr.17: 39707404 - 39726351
ENST00000584450
Protein coding
CCDS77016
NM_001289937
Chr.17: 39700024 - 39728044
ENST00000584908
Retained intron
Chr.17: 39700227 - 39712330