Assay name
HS_NUP98_1539935 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for NUP98
Best transcript assay for ENST00000397013
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Best transcript assay for ENST00000397013
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
NUP98
Gene aliases
NUP96;Nup98-Nup96;Nup98-96;NUP196
Species
Homo sapiens
Main target
ENST00000397013
Exons numbers
2-3
Ensembl exons ids
ENSE00003594088;ENSE00003490513
Amplicon start
188
Amplicon length
113
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000324932
Protein coding
CCDS7746
NM_016320
Chr.11: 3675019 - 3797554
ENST00000355260
Protein coding
CCDS31347
NM_139132
Chr.11: 3675799 - 3797458
ENST00000359171
Protein coding
NM_001365126
Chr.11: 3675011 - 3797792
ENST00000397004
Protein coding
CCDS41606
NM_139131
Chr.11: 3711553 - 3797541
ENST00000397007
Protein coding
CCDS41605
NM_005387
Chr.11: 3711835 - 3797547
ENST00000397013
Nonsense mediated decay
Chr.11: 3731483 - 3768680
ENST00000461047
Retained intron
Chr.11: 3760141 - 3762960
ENST00000650171
Nonsense mediated decay
Chr.11: 3675031 - 3797561