Assay name
HS_ITPR1_1547083 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for ITPR1
Assay targets 33 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 33 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
ITPR1
Gene aliases
Insp3r1;IP3R1;ACV;PPP1R94;SCA15;SCA16;SCA29
Species
Homo sapiens
Main target
ENST00000649694
Exons numbers
19-20
Ensembl exons ids
ENSE00003643907;ENSE00003837356
Amplicon start
5625
Amplicon length
119
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000302640
Protein coding
CCDS54551
NM_001168272
Chr.3: 4493348 - 4847840
ENST00000354582
Protein coding
Chr.3: 4493370 - 4847497
ENST00000357086
Protein coding
CCDS46740
NM_001099952
Chr.3: 4493345 - 4847506
ENST00000443694
Protein coding
CCDS54551
Chr.3: 4516492 - 4847395
ENST00000456211
Protein coding
CCDS54550
NM_002222
Chr.3: 4493452 - 4847397
ENST00000463980
Processed transcript
Chr.3: 4799784 - 4847270
ENST00000467545
Retained intron
Chr.3: 4795000 - 4846343
ENST00000493491
Processed transcript
Chr.3: 4799795 - 4847348
ENST00000544951
Protein coding
Chr.3: 4493550 - 4846710
ENST00000647685
Protein coding
Chr.3: 4814619 - 4847154
ENST00000647708
Nonsense mediated decay
Chr.3: 4693600 - 4847242
ENST00000647717
Retained intron
Chr.3: 4674969 - 4847103
ENST00000647997
Processed transcript
Chr.3: 4804916 - 4847256
ENST00000648016
Protein coding
Chr.3: 4685173 - 4847353
ENST00000648038
Protein coding
Chr.3: 4670886 - 4847184
ENST00000648208
Processed transcript
Chr.3: 4804169 - 4847381
ENST00000648212
Protein coding
Chr.3: 4680678 - 4847380
ENST00000648266
Protein coding
Chr.3: 4493454 - 4847498
ENST00000648309
Protein coding
Chr.3: 4516487 - 4847326
ENST00000648431
Protein coding
Chr.3: 4675141 - 4847286
ENST00000648770
Processed transcript
Chr.3: 4804242 - 4847380
ENST00000649015
Protein coding
Chr.3: 4493583 - 4847422
ENST00000649139
Protein coding
Chr.3: 4814609 - 4847434
ENST00000649144
Retained intron
Chr.3: 4711601 - 4847270
ENST00000649314
Processed transcript
Chr.3: 4804198 - 4847220
ENST00000649430
Retained intron
Chr.3: 4814323 - 4847451
ENST00000649694
Retained intron
Chr.3: 4730383 - 4847370
ENST00000649767
Retained intron
Chr.3: 4799125 - 4847248
ENST00000649908
Protein coding
Chr.3: 4814639 - 4847181
ENST00000650074
Processed transcript
Chr.3: 4799741 - 4847304
ENST00000650139
Retained intron
Chr.3: 4798730 - 4847372
ENST00000650294
Protein coding
Chr.3: 4493561 - 4847206
ENST00000650552
Processed transcript
Chr.3: 4804213 - 4847353