Assay name
HS_BECN1_1643724 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for BECN1
Best transcript assay for ENST00000361523
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000361523
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
BECN1
Gene aliases
ATG6;VPS30
Species
Homo sapiens
Main target
ENST00000361523
Exons numbers
10-11
Ensembl exons ids
ENSE00003582214;ENSE00003600057
Amplicon start
1135
Amplicon length
100
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000361523
Protein coding
CCDS11441
NM_003766
Chr.17: 42810134 - 42824263
ENST00000543382
Retained intron
Chr.17: 42810414 - 42824287
ENST00000586754
Processed transcript
Chr.17: 42811724 - 42815995
ENST00000587880
Nonsense mediated decay
Chr.17: 42810716 - 42813989
ENST00000590099
Protein coding
CCDS11441
NM_001313999;NM_001313998
Chr.17: 42810134 - 42824282