Assay name
HS_MBD1_1748457 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for MBD1
Assay targets 21 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 21 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
MBD1
Gene aliases
PCM1;CXXC3
Species
Homo sapiens
Main target
ENST00000592060
Exons numbers
1-2
Ensembl exons ids
ENSE00002828037;ENSE00001640699
Amplicon start
86
Amplicon length
110
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000269468
Protein coding
CCDS11943
NM_001323950;NM_015846
Chr.18: 50268847 - 50281774
ENST00000269471
Protein coding
CCDS32832
NM_001323953;NM_015845
Chr.18: 50268847 - 50281774
ENST00000339998
Protein coding
CCDS56072
NM_001204142
Chr.18: 50268847 - 50281476
ENST00000347968
Protein coding
CCDS11942
NM_001323952;NM_015844
Chr.18: 50268847 - 50281774
ENST00000353909
Protein coding
CCDS11944
NM_015847
Chr.18: 50268841 - 50281476
ENST00000382948
Protein coding
CCDS11943
NM_001204139
Chr.18: 50267517 - 50281774
ENST00000398488
Protein coding
CCDS11941
NM_002384
Chr.18: 50271501 - 50279992
ENST00000398493
Protein coding
CCDS11942
Chr.18: 50271469 - 50281500
ENST00000398495
Protein coding
NM_001204140
Chr.18: 50271042 - 50280010
ENST00000457839
Protein coding
CCDS56073
NM_001323949;NM_001204138;NM_001204137
Chr.18: 50271050 - 50281466
ENST00000585595
Protein coding
CCDS56073
Chr.18: 50269734 - 50281307
ENST00000585672
Protein coding
CCDS59318
NM_001204141;NM_001323951
Chr.18: 50266882 - 50281459
ENST00000586118
Retained intron
Chr.18: 50275651 - 50281521
ENST00000587605
Protein coding
CCDS59319
NM_001204143
Chr.18: 50269557 - 50281767
ENST00000588937
Protein coding
CCDS32832
Chr.18: 50269629 - 50279992
ENST00000589867
Retained intron
Chr.18: 50276662 - 50281441
ENST00000590208
Protein coding
CCDS59320
NM_001323954;NM_001204136;NM_001323947;NM_001323942
Chr.18: 50269031 - 50281684
ENST00000590215
Nonsense mediated decay
Chr.18: 50276714 - 50281671
ENST00000591416
Protein coding
CCDS11943
Chr.18: 50268846 - 50281769
ENST00000591535
Protein coding
CCDS56071
NM_001204151
Chr.18: 50271501 - 50279992
ENST00000592060
Protein coding
Chr.18: 50266886 - 50276997