Assay name
HS_NFKB1_2475088 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR and dPCR wet-lab validated
Assay specification
Best coverage assay for NFKB1
Best transcript assay for ENST00000651197
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Best transcript assay for ENST00000651197
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Gene symbol
NFKB1
Gene aliases
KBF1;p105;NFKB-p50;p50;NF-kappaB;NFkappaB;NF-kB1
Species
Homo sapiens
Main target
ENST00000651197
Exons numbers
5-6
Ensembl exons ids
ENSE00003529712;ENSE00003521949
Amplicon start
643
Amplicon length
104
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000226574
Protein coding
CCDS3657
NM_003998
Chr.4: 102501359 - 102617302
ENST00000394820
Protein coding
CCDS54783
NM_001165412
Chr.4: 102501331 - 102616915
ENST00000502367
Retained intron
Chr.4: 102537599 - 102567084
ENST00000505458
Protein coding
CCDS54783
NM_001319226
Chr.4: 102501898 - 102617117
ENST00000507079
Protein coding
Chr.4: 102501472 - 102577039
ENST00000509165
Protein coding
Chr.4: 102503375 - 102576902
ENST00000513803
Processed transcript
Chr.4: 102537587 - 102579038
ENST00000651197
Protein coding
CCDS3657
Chr.4: 102501359 - 102617302
ENST00000652569
Nonsense mediated decay
Chr.4: 102529880 - 102617302
ENST00000652619
Nonsense mediated decay
Chr.4: 102501405 - 102617299