Assay name
HS_PFDN5_1250260 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for PFDN5
Assay targets 13 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 13 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
PFDN5
Gene aliases
PFD5;MM-1
Species
Homo sapiens
Main target
ENST00000552341
Exons numbers
4-5
Ensembl exons ids
ENSE00003693899;ENSE00001759857
Amplicon start
1738
Amplicon length
100
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000243040
Nonsense mediated decay
Chr.12: 53295542 - 53299450
ENST00000334478
Protein coding
CCDS8853
NM_002624
Chr.12: 53295542 - 53299450
ENST00000351500
Protein coding
CCDS8854
NM_145897
Chr.12: 53295525 - 53299450
ENST00000547130
Nonsense mediated decay
Chr.12: 53295542 - 53299450
ENST00000548984
Retained intron
Chr.12: 53297788 - 53299446
ENST00000549759
Protein coding
Chr.12: 53295582 - 53299447
ENST00000550846
Protein coding
Chr.12: 53295536 - 53299450
ENST00000550880
Nonsense mediated decay
Chr.12: 53295525 - 53299445
ENST00000550964
Retained intron
Chr.12: 53297613 - 53299446
ENST00000551018
Protein coding
CCDS8853
Chr.12: 53295291 - 53299450
ENST00000552341
Retained intron
Chr.12: 53295542 - 53299446
ENST00000552548
Retained intron
Chr.12: 53296035 - 53299343
ENST00000552742
Nonsense mediated decay
Chr.12: 53295556 - 53299450