Assay name
HS_EPCAM_1318969 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for EPCAM
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
EPCAM
Gene aliases
Ly74;TROP1;GA733-2;EGP34;EGP40;EGP-2;KSA;CD326;Ep-CAM;HEA125;KS1/4;MK-1;MH99;MOC31;MOC-31;323/A3;17-1A;TACST-1;CO-17A;ESA;BerEp4;Ber-Ep4;M4S1;MIC18;TACSTD1
Species
Homo sapiens
Main target
ENST00000263735
Exons numbers
3-4
Ensembl exons ids
ENSE00000809826;ENSE00003552250
Amplicon start
728
Amplicon length
75
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000263735
Protein coding
CCDS1833
NM_002354
Chr.2: 47369148 - 47387034
ENST00000405271
Protein coding
Chr.2: 47345158 - 47386900
ENST00000456133
Nonsense mediated decay
Chr.2: 47345163 - 47387601
ENST00000474691
Retained intron
Chr.2: 47369475 - 47375254
ENST00000490733
Retained intron
Chr.2: 47373775 - 47385210