Assay name
HS_CLK1_1463946 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for CLK1
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
CLK1
Species
Homo sapiens
Main target
ENST00000473565
Exons numbers
10-11
Ensembl exons ids
ENSE00003619640;ENSE00001859513
Amplicon start
2772
Amplicon length
85
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000321356
Protein coding
CCDS2331
NM_004071
Chr.2: 200853009 - 200864658
ENST00000409403
Nonsense mediated decay
Chr.2: 200853113 - 200864662
ENST00000409769
Protein coding
Chr.2: 200853098 - 200858166
ENST00000432425
Nonsense mediated decay
Chr.2: 200853081 - 200864656
ENST00000434813
Protein coding
CCDS54427
NM_001162407
Chr.2: 200853196 - 200864561
ENST00000461326
Retained intron
Chr.2: 200853247 - 200854134
ENST00000461981
Retained intron
Chr.2: 200853076 - 200860983
ENST00000464454
Retained intron
Chr.2: 200853077 - 200854013
ENST00000472679
Retained intron
Chr.2: 200853082 - 200853995
ENST00000473565
Retained intron
Chr.2: 200853081 - 200864691
ENST00000496205
Retained intron
Chr.2: 200853332 - 200854886
ENST00000621181
Protein coding
Chr.2: 200853009 - 200864744