Assay name
HS_ATXN2_1561235 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for ATXN2
Assay targets 15 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 15 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
ATXN2
Gene aliases
ATX2;SCA2;TNRC13
Species
Homo sapiens
Main target
ENST00000377617
Exons numbers
5-6
Ensembl exons ids
ENSE00003609750;ENSE00003627297
Amplicon start
1156
Amplicon length
89
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000377617
Protein coding
CCDS31902
NM_002973
Chr.12: 111452214 - 111599676
ENST00000389153
Protein coding
Chr.12: 111452214 - 111598822
ENST00000392645
Retained intron
Chr.12: 111512473 - 111598566
ENST00000471866
Retained intron
Chr.12: 111519913 - 111552734
ENST00000483311
Nonsense mediated decay
Chr.12: 111452296 - 111599276
ENST00000535949
Protein coding
CCDS81738
NM_001310123
Chr.12: 111452754 - 111599673
ENST00000542287
Protein coding
CCDS81739
NM_001310121
Chr.12: 111452754 - 111599673
ENST00000548492
Protein coding
Chr.12: 111520020 - 111597807
ENST00000550104
Protein coding
CCDS31902
Chr.12: 111452268 - 111599676
ENST00000608853
Protein coding
Chr.12: 111452214 - 111599350
ENST00000616825
Protein coding
CCDS81738
Chr.12: 111452215 - 111599676
ENST00000642389
Nonsense mediated decay
Chr.12: 111443485 - 111599122
ENST00000643669
Protein coding
Chr.12: 111452223 - 111599122
ENST00000644883
Protein coding
Chr.12: 111468358 - 111599122
ENST00000647305
Protein coding
Chr.12: 111469426 - 111599122