Assay name
HS_CHD1_1572626 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for CHD1
Best transcript assay for ENST00000505657
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000505657
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
CHD1
Species
Homo sapiens
Main target
ENST00000505657
Exons numbers
4-5
Ensembl exons ids
ENSE00003791542;ENSE00002026767
Amplicon start
562
Amplicon length
74
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000284049
Protein coding
CCDS34204
NM_001270
Chr.5: 98855204 - 98926534
ENST00000505657
Nonsense mediated decay
Chr.5: 98856567 - 98868629
ENST00000512392
Retained intron
Chr.5: 98855732 - 98860682
ENST00000512844
Nonsense mediated decay
Chr.5: 98856283 - 98868539
ENST00000513064
Retained intron
Chr.5: 98856425 - 98858664
ENST00000514344
Retained intron
Chr.5: 98855204 - 98872557
ENST00000614616
Protein coding
CCDS34204
Chr.5: 98853985 - 98928957