Assay name
HS_CXXC1_1897099 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for CXXC1
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
CXXC1
Gene aliases
HsT2645;PCCX1;hCGBP;PHF18;CGBP;SPP1;CFP1;ZCGPC1
Species
Homo sapiens
Main target
ENST00000589940
Exons numbers
2-3
Ensembl exons ids
ENSE00003470029;ENSE00002941241
Amplicon start
168
Amplicon length
83
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000285106
Protein coding
CCDS11945
NM_014593
Chr.18: 50282343 - 50288304
ENST00000412036
Protein coding
CCDS45866
NM_001101654
Chr.18: 50282343 - 50287636
ENST00000586365
Retained intron
Chr.18: 50285804 - 50287701
ENST00000586837
Protein coding
Chr.18: 50285221 - 50287570
ENST00000587396
Processed transcript
Chr.18: 50286181 - 50287679
ENST00000589548
Protein coding
Chr.18: 50285129 - 50287680
ENST00000589940
Protein coding
Chr.18: 50282347 - 50287651
ENST00000590901
Retained intron
Chr.18: 50282349 - 50287115