Assay name
HS_NSD2_2475348 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for NSD2
Best transcript assay for ENST00000514045
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000514045
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
NSD2
Gene aliases
MMSET;KMT3G;WHSC1
Species
Homo sapiens
Main target
ENST00000514045
Exons numbers
8-9
Ensembl exons ids
ENSE00001604875;ENSE00002026611
Amplicon start
1813
Amplicon length
86
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000312087
Nonsense mediated decay
CCDS3356
Chr.4: 1892845 - 1982203
ENST00000353275
Nonsense mediated decay
CCDS3356
Chr.4: 1892782 - 1982203
ENST00000382891
Protein coding
CCDS33940
NM_133335
Chr.4: 1892782 - 1982206
ENST00000382892
Protein coding
CCDS33940
NM_133331
Chr.4: 1892782 - 1982203
ENST00000382895
Protein coding
CCDS33940
NM_133330
Chr.4: 1892845 - 1982207
ENST00000398261
Protein coding
CCDS3356
NM_133334
Chr.4: 1900626 - 1948818
ENST00000420906
Protein coding
CCDS46999
NM_007331
Chr.4: 1892845 - 1942575
ENST00000503128
Protein coding
CCDS3356
Chr.4: 1899218 - 1948818
ENST00000508803
Protein coding
CCDS33940
NM_001042424
Chr.4: 1871393 - 1982192
ENST00000514045
Protein coding
CCDS46999
Chr.4: 1871461 - 1941750