Assay name
MM_CTCF_1948565 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Ctcf
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Ctcf
Species
Mus musculus
Main target
ENSMUST00000137735
Exons numbers
1-2
Ensembl exons ids
ENSMUSE00000769508;ENSMUSE00001259706
Amplicon start
93
Amplicon length
106
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000005841
Protein coding
CCDS22606
NM_001358924;NM_181322
Chr.8: 105636579 - 105682922
ENSMUST00000132679
Processed transcript
Chr.8: 105636568 - 105681647
ENSMUST00000137735
Processed transcript
Chr.8: 105676011 - 105679567
ENSMUST00000156436
Retained intron
Chr.8: 105676011 - 105680617