Assay name
HS_ATXN3_1268127 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for ATXN3
Assay targets 46 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 46 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
ATXN3
Gene aliases
ATX3;JOS;SCA3;MJD
Species
Homo sapiens
Main target
ENST00000557311
Exons numbers
1-2
Ensembl exons ids
ENSE00003635015;ENSE00003654296
Amplicon start
13
Amplicon length
134
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000340660
Protein coding
CCDS32143
NM_030660
Chr.14: 92064094 - 92106610
ENST00000359366
Nonsense mediated decay
Chr.14: 92062786 - 92106590
ENST00000393287
Protein coding
NM_001127697
Chr.14: 92058552 - 92106621
ENST00000429774
Protein coding
CCDS73680
NM_001164779;NM_001164781
Chr.14: 92058552 - 92106621
ENST00000502250
Protein coding
CCDS53908
NM_001164780
Chr.14: 92063881 - 92106582
ENST00000503767
Protein coding
CCDS45154
NM_001127696
Chr.14: 92064094 - 92106600
ENST00000506466
Protein coding
Chr.14: 92081023 - 92106573
ENST00000515746
Nonsense mediated decay
Chr.14: 92080988 - 92106562
ENST00000532032
Protein coding
Chr.14: 92070745 - 92106562
ENST00000545170
Protein coding
Chr.14: 92058552 - 92106621
ENST00000553287
Processed transcript
Chr.14: 92070938 - 92106574
ENST00000553309
Processed transcript
Chr.14: 92070938 - 92106574
ENST00000553488
Nonsense mediated decay
Chr.14: 92070938 - 92106574
ENST00000553491
Protein coding
Chr.14: 92070938 - 92106574
ENST00000553498
Processed transcript
Chr.14: 92070938 - 92106574
ENST00000553570
Nonsense mediated decay
Chr.14: 92070938 - 92106574
ENST00000553686
Processed transcript
Chr.14: 92070938 - 92106574
ENST00000554040
Processed transcript
Chr.14: 92070938 - 92106574
ENST00000554214
Processed transcript
Chr.14: 92070938 - 92106574
ENST00000554350
Nonsense mediated decay
Chr.14: 92070938 - 92106574
ENST00000554491
Processed transcript
Chr.14: 92070938 - 92106574
ENST00000554592
Protein coding
Chr.14: 92070935 - 92106574
ENST00000554672
Protein coding
Chr.14: 92071011 - 92106574
ENST00000554673
Nonsense mediated decay
Chr.14: 92080965 - 92106574
ENST00000554994
Nonsense mediated decay
Chr.14: 92070938 - 92106574
ENST00000555381
Protein coding
Chr.14: 92070935 - 92106574
ENST00000555816
Nonsense mediated decay
Chr.14: 92070935 - 92106574
ENST00000555958
Processed transcript
Chr.14: 92070938 - 92106574
ENST00000556082
Nonsense mediated decay
Chr.14: 92071011 - 92106574
ENST00000556220
Protein coding
Chr.14: 92070938 - 92106574
ENST00000556274
Nonsense mediated decay
Chr.14: 92070938 - 92106574
ENST00000556288
Nonsense mediated decay
Chr.14: 92070938 - 92106574
ENST00000556315
Nonsense mediated decay
Chr.14: 92071011 - 92106574
ENST00000556374
Nonsense mediated decay
Chr.14: 92070938 - 92106574
ENST00000556671
Nonsense mediated decay
Chr.14: 92070938 - 92106574
ENST00000556898
Nonsense mediated decay
Chr.14: 92070935 - 92106574
ENST00000556958
Nonsense mediated decay
Chr.14: 92070938 - 92106574
ENST00000557030
Nonsense mediated decay
Chr.14: 92070938 - 92106572
ENST00000557311
Protein coding
Chr.14: 92070938 - 92106574
ENST00000558190
Protein coding
CCDS9900
NM_001164778;NM_004993
Chr.14: 92058552 - 92106625
ENST00000617719
Protein coding
Chr.14: 92070938 - 92106574
ENST00000620536
Protein coding
Chr.14: 92070976 - 92106621
ENST00000621269
Protein coding
Chr.14: 92080968 - 92106621
ENST00000644486
Protein coding
CCDS9900
Chr.14: 92058552 - 92106564
ENST00000646485
Nonsense mediated decay
Chr.14: 92071011 - 92106574
ENST00000647161
Nonsense mediated decay
Chr.14: 92049611 - 92106580