Assay name
HS_LETMD1_1854915 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for LETMD1
Assay targets 18 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 18 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
LETMD1
Gene aliases
HCCR1;HCCR;HCCR-2;HCCR-1;HCCR2;SLC55A3
Species
Homo sapiens
Main target
ENST00000550929
Exons numbers
7-8
Ensembl exons ids
ENSE00003611934;ENSE00003481388
Amplicon start
778
Amplicon length
94
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000262055
Protein coding
CCDS8806
NM_001351315;NM_001351316;NM_001351317;NM_001351325;NM_015416
Chr.12: 51048327 - 51060424
ENST00000380135
Nonsense mediated decay
Chr.12: 51048344 - 51060363
ENST00000418425
Protein coding
CCDS58231
NM_001243689
Chr.12: 51048338 - 51060413
ENST00000546814
Retained intron
Chr.12: 51055880 - 51059534
ENST00000547008
Protein coding
CCDS73469
NM_001351328;NM_001351321;NM_001300765;NM_001351333
Chr.12: 51048341 - 51060369
ENST00000547029
Processed transcript
Chr.12: 51048319 - 51058128
ENST00000547318
Nonsense mediated decay
Chr.12: 51048301 - 51060409
ENST00000547555
Nonsense mediated decay
Chr.12: 51048327 - 51060424
ENST00000547660
Protein coding
Chr.12: 51048327 - 51059412
ENST00000548516
Processed transcript
Chr.12: 51048358 - 51059659
ENST00000549686
Nonsense mediated decay
Chr.12: 51048338 - 51059532
ENST00000550100
Nonsense mediated decay
Chr.12: 51048344 - 51060303
ENST00000550814
Protein coding
Chr.12: 51048327 - 51058067
ENST00000550929
Protein coding
CCDS44883
NM_001351324;NM_001351319;NM_001351320;NM_001351327;NM_001351322;NM_001351323;NM_001351312;NM_001351326
Chr.12: 51048318 - 51059805
ENST00000551477
Protein coding
Chr.12: 51047962 - 51058087
ENST00000551931
Protein coding
Chr.12: 51055909 - 51059702
ENST00000552645
Retained intron
Chr.12: 51048874 - 51060421
ENST00000552739
Protein coding
CCDS86301
NM_001351335;NM_001351336;NM_001351334;NM_001351313;NM_001351332;NM_001351330
Chr.12: 51048346 - 51060401