Assay name
HS_COL18A1_1372901 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for COL18A1
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
COL18A1
Gene aliases
KS;KNO1;KNO
Species
Homo sapiens
Main target
ENST00000423214
Exons numbers
4-5
Ensembl exons ids
ENSE00003643178;ENSE00003588504
Amplicon start
633
Amplicon length
63
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000342220
Protein coding
Chr.21: 45490275 - 45513720
ENST00000355480
Protein coding
CCDS42972
NM_030582
Chr.21: 45455522 - 45513720
ENST00000359759
Protein coding
CCDS77643
NM_130444
Chr.21: 45455531 - 45513719
ENST00000400337
Protein coding
CCDS42971
NM_130445
Chr.21: 45405137 - 45513720
ENST00000423214
Protein coding
Chr.21: 45505358 - 45512263
ENST00000473212
Retained intron
Chr.21: 45506019 - 45512567
ENST00000651438
Protein coding
CCDS42971
Chr.21: 45405165 - 45513720