Assay name
HS_IKBKB_1485040 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for IKBKB
Best transcript assay for ENST00000520810
Assay targets 17 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000520810
Assay targets 17 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
IKBKB
Gene aliases
IKK2;NFKBIKB;IKK-beta;IKKB
Species
Homo sapiens
Main target
ENST00000520810
Exons numbers
19-20
Ensembl exons ids
ENSE00003580491;ENSE00003560365
Amplicon start
2145
Amplicon length
79
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000342222
Nonsense mediated decay
Chr.8: 42271334 - 42332450
ENST00000416505
Protein coding
CCDS55228
NM_001190720
Chr.8: 42271302 - 42332653
ENST00000517890
Nonsense mediated decay
Chr.8: 42271316 - 42331132
ENST00000518679
Nonsense mediated decay
Chr.8: 42271319 - 42331910
ENST00000519938
Retained intron
Chr.8: 42320706 - 42331609
ENST00000520201
Retained intron
Chr.8: 42271389 - 42332455
ENST00000520655
Nonsense mediated decay
Chr.8: 42271463 - 42331909
ENST00000520810
Protein coding
CCDS6128
NM_001556;NM_001242778
Chr.8: 42271302 - 42332460
ENST00000520835
Protein coding
Chr.8: 42271318 - 42331067
ENST00000521661
Nonsense mediated decay
Chr.8: 42271436 - 42329215
ENST00000522133
Retained intron
Chr.8: 42322418 - 42326468
ENST00000523018
Retained intron
Chr.8: 42322441 - 42329314
ENST00000523517
Nonsense mediated decay
Chr.8: 42272083 - 42331121
ENST00000523599
Retained intron
Chr.8: 42319156 - 42332316
ENST00000629753
Protein coding
Chr.8: 42271302 - 42332653
ENST00000648136
Retained intron
Chr.8: 42314371 - 42331527
ENST00000649612
Protein coding
CCDS6128
Chr.8: 42271302 - 42332460