Assay name
HS_APC_2474570 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for APC
Best transcript assay for ENST00000512211
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000512211
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
APC
Gene aliases
DP2;DP3;DP2.5;PPP1R46
Species
Homo sapiens
Main target
ENST00000512211
Exons numbers
12-13
Ensembl exons ids
ENSE00003580884;ENSE00003488464
Amplicon start
1575
Amplicon length
132
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000257430
Protein coding
CCDS4107
NM_001354895;NM_001354906;NM_001354896;NM_001354903;NM_001354899;NM_001354900;NM_001354901;NM_001354905;NM_000038
Chr.5: 112737885 - 112846239
ENST00000504915
Protein coding
Chr.5: 112821949 - 112837722
ENST00000507379
Protein coding
NM_001354897;NM_001354902;NM_001127511
Chr.5: 112707522 - 112839054
ENST00000508376
Protein coding
CCDS4107
NM_001127510;NM_001354898;NM_001354904
Chr.5: 112737895 - 112846056
ENST00000508624
Nonsense mediated decay
Chr.5: 112737885 - 112842755
ENST00000512211
Protein coding
Chr.5: 112738332 - 112839508