Assay name
HS_ARNT_2474575 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR and dPCR wet-lab validated
Assay specification
Best coverage assay for ARNT
Best transcript assay for ENST00000358595
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Best transcript assay for ENST00000358595
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Gene symbol
ARNT
Gene aliases
HIF-1beta;bHLHe2
Species
Homo sapiens
Main target
ENST00000358595
Exons numbers
5-6
Ensembl exons ids
ENSE00001044520;ENSE00001044525
Amplicon start
284
Amplicon length
96
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000354396
Protein coding
CCDS65642
NM_001286036
Chr.1: 150810859 - 150876579
ENST00000358595
Protein coding
CCDS970
NM_001668
Chr.1: 150809713 - 150876599
ENST00000471844
Nonsense mediated decay
Chr.1: 150810094 - 150876705
ENST00000505979
Retained intron
Chr.1: 150839399 - 150876609
ENST00000515192
Protein coding
CCDS65641
NM_001350226;NM_001350225;NM_001286035;NM_001350224
Chr.1: 150811681 - 150876708