Assay name
HS_HDAC11_2474873 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for HDAC11
Best transcript assay for ENST00000437379
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000437379
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
HDAC11
Species
Homo sapiens
Main target
ENST00000437379
Exons numbers
6-7
Ensembl exons ids
ENSE00003499345;ENSE00003486563
Amplicon start
531
Amplicon length
87
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000295757
Protein coding
CCDS2615
NM_024827
Chr.3: 13480306 - 13506416
ENST00000402271
Protein coding
CCDS82738
NM_001330636
Chr.3: 13480303 - 13504849
ENST00000405478
Protein coding
Chr.3: 13480344 - 13504142
ENST00000425430
Nonsense mediated decay
Chr.3: 13480306 - 13504956
ENST00000433119
Protein coding
Chr.3: 13479724 - 13505334
ENST00000437379
Protein coding
Chr.3: 13481246 - 13506407
ENST00000446613
Protein coding
Chr.3: 13480215 - 13506424
ENST00000487585
Retained intron
Chr.3: 13481382 - 13503239
ENST00000498532
Retained intron
Chr.3: 13496588 - 13504113
ENST00000522202
Protein coding
CCDS46760
NM_001136041
Chr.3: 13480411 - 13505233