Assay name
HS_PRKCZ_2475157 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for PRKCZ
Best transcript assay for ENST00000470596
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000470596
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
PRKCZ
Gene aliases
PKC2
Species
Homo sapiens
Main target
ENST00000470596
Exons numbers
3-5
Ensembl exons ids
ENSE00003484975;ENSE00003784140;ENSE00003791533
Amplicon start
487
Amplicon length
135
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000378567
Protein coding
CCDS37
NM_002744
Chr.1: 2050411 - 2185395
ENST00000400921
Protein coding
CCDS41229
NM_001350804;NM_001350806;NM_001350803;NM_001033581;NM_001350805;NM_001033582
Chr.1: 2073462 - 2185390
ENST00000461106
Protein coding
CCDS55563
NM_001242874
Chr.1: 2073986 - 2185190
ENST00000461465
Protein coding
Chr.1: 2074688 - 2150836
ENST00000470511
Protein coding
Chr.1: 2116205 - 2150897
ENST00000470596
Protein coding
Chr.1: 2074855 - 2150945
ENST00000470986
Protein coding
Chr.1: 2111654 - 2150978
ENST00000471018
Protein coding
Chr.1: 2133638 - 2148924
ENST00000481140
Nonsense mediated decay
Chr.1: 2082248 - 2150936
ENST00000482686
Protein coding
Chr.1: 2104716 - 2150870
ENST00000496325
Protein coding
Chr.1: 2075244 - 2150863