Assay name​
HS_SMARCA2_1402148 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for SMARCA2
Assay targets 33 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 33 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
SMARCA2
Gene aliases​
BAF190;hSNF2a;hBRM;Sth1p;SNF2LA;BRM;SNF2;SWI2;SNF2L2
Species​
Homo sapiens
Main target​
ENST00000634343
Exons numbers​
2-3
Ensembl exons ids​
ENSE00003658720;ENSE00001750260
Amplicon start​
415
Amplicon length​
69
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000302401
Protein coding
CCDS75808
NM_001289400
Chr.9: 2158456 - 2193624
ENST00000324954
Protein coding
CCDS75807
NM_001289398
Chr.9: 2157683 - 2193574
ENST00000349721
Protein coding
CCDS34977
NM_003070
Chr.9: 2015347 - 2193620
ENST00000357248
Protein coding
CCDS34978
NM_139045
Chr.9: 2015186 - 2193620
ENST00000382183
Protein coding
Chr.9: 2158458 - 2193042
ENST00000382185
Protein coding
CCDS83339
NM_001289399
Chr.9: 2158452 - 2193387
ENST00000382186
Protein coding
Chr.9: 2158473 - 2192752
ENST00000382194
Protein coding
CCDS34978
Chr.9: 2017412 - 2193577
ENST00000382203
Protein coding
CCDS34977
NM_001289396
Chr.9: 2021945 - 2193624
ENST00000416751
Protein coding
Chr.9: 2159945 - 2191311
ENST00000417599
Protein coding
CCDS83339
Chr.9: 2158461 - 2192758
ENST00000423555
Protein coding
Chr.9: 2158449 - 2191298
ENST00000450198
Protein coding
CCDS83338
NM_001289397
Chr.9: 2015219 - 2193574
ENST00000452193
Protein coding
Chr.9: 2157680 - 2186154
ENST00000634338
Protein coding
Chr.9: 2158493 - 2191292
ENST00000634343
Protein coding
Chr.9: 2159672 - 2186223
ENST00000634435
Protein coding
Chr.9: 2158582 - 2191294
ENST00000634688
Protein coding
Chr.9: 2160613 - 2186143
ENST00000634772
Protein coding
Chr.9: 2110357 - 2186121
ENST00000634781
Protein coding
Chr.9: 2160264 - 2192751
ENST00000634931
Protein coding
Chr.9: 2158303 - 2192838
ENST00000634989
Nonsense mediated decay
Chr.9: 2158456 - 2192856
ENST00000635133
Protein coding
Chr.9: 2158239 - 2186177
ENST00000635388
Protein coding
Chr.9: 2158476 - 2191339
ENST00000635530
Protein coding
Chr.9: 2158475 - 2191300
ENST00000635590
Nonsense mediated decay
Chr.9: 2158453 - 2193571
ENST00000635659
Nonsense mediated decay
Chr.9: 2159779 - 2191342
ENST00000635739
Processed transcript
Chr.9: 2068953 - 2193624
ENST00000636157
Processed transcript
Chr.9: 2085975 - 2193624
ENST00000636367
Nonsense mediated decay
Chr.9: 2158470 - 2193603
ENST00000638139
Processed transcript
Chr.9: 2097236 - 2193607
ENST00000639760
Protein coding
Chr.9: 2123850 - 2193560