Assay name
HS_PTCH1_1603860 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for PTCH1
Best transcript assay for ENST00000331920
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000331920
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
PTCH1
Gene aliases
BCNS;NBCCS;PTCH
Species
Homo sapiens
Main target
ENST00000331920
Exons numbers
16-17
Ensembl exons ids
ENSE00001657782;ENSE00001796032
Amplicon start
2910
Amplicon length
109
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000331920
Protein coding
CCDS6714
NM_001354918;NM_000264
Chr.9: 95442980 - 95508661
ENST00000375274
Protein coding
CCDS47995
NM_001083603
Chr.9: 95446159 - 95516965
ENST00000375290
Nonsense mediated decay
Chr.9: 95443412 - 95506599
ENST00000418258
Protein coding
CCDS43851
NM_001083607
Chr.9: 95442984 - 95507199
ENST00000421141
Protein coding
CCDS43851
NM_001083605;NM_001083604
Chr.9: 95442984 - 95508040
ENST00000429896
Protein coding
CCDS43851
NM_001083606
Chr.9: 95444162 - 95507417
ENST00000430669
Protein coding
CCDS47996
Chr.9: 95443412 - 95517057
ENST00000437951
Protein coding
CCDS47996
NM_001083602
Chr.9: 95442984 - 95516965