Assay name
HS_SF3B1_1486332 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for SF3B1
Best transcript assay for ENST00000470268
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Best transcript assay for ENST00000470268
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
SF3B1
Gene aliases
SAP155;SF3b155;PRPF10;Prp10;Hsh155
Species
Homo sapiens
Main target
ENST00000470268
Exons numbers
2-3
Ensembl exons ids
ENSE00003846614;ENSE00003846645
Amplicon start
199
Amplicon length
92
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000335508
Protein coding
CCDS33356
NM_012433
Chr.2: 197389784 - 197435091
ENST00000409915
Nonsense mediated decay
CCDS46479
Chr.2: 197416891 - 197435027
ENST00000414963
Protein coding
CCDS46479
NM_001005526
Chr.2: 197418796 - 197435079
ENST00000470268
Retained intron
Chr.2: 197389792 - 197435044
ENST00000487698
Protein coding
CCDS82550
NM_001308824
Chr.2: 197418796 - 197435079
ENST00000652026
Nonsense mediated decay
CCDS82550
Chr.2: 197388515 - 197435047
ENST00000652738
Nonsense mediated decay
Chr.2: 197388515 - 197435029