Assay name
HS_VPS28_1699053 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for VPS28
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
VPS28
Species
Homo sapiens
Main target
ENST00000645315
Exons numbers
3-5
Ensembl exons ids
ENSE00003819846;ENSE00003830239;ENSE00003827745
Amplicon start
144
Amplicon length
68
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000642202
Protein coding
Chr.CHR_HG2419_PATCH: 144423616 - 144426982
ENST00000642606
Protein coding
Chr.CHR_HG2419_PATCH: 144424104 - 144428542
ENST00000642867
Protein coding
Chr.CHR_HG2419_PATCH: 144423616 - 144426982
ENST00000643186
Protein coding
Chr.CHR_HG2419_PATCH: 144423616 - 144428547
ENST00000643289
Retained intron
Chr.CHR_HG2419_PATCH: 144423671 - 144426997
ENST00000643640
Protein coding
Chr.CHR_HG2419_PATCH: 144425717 - 144428543
ENST00000644457
Nonsense mediated decay
Chr.CHR_HG2419_PATCH: 144423619 - 144426982
ENST00000644818
Nonsense mediated decay
Chr.CHR_HG2419_PATCH: 144423630 - 144426982
ENST00000645315
Processed transcript
Chr.CHR_HG2419_PATCH: 144425395 - 144428542
ENST00000646588
Protein coding
NM_183057
Chr.CHR_HG2419_PATCH: 144423600 - 144428562
ENST00000646717
Protein coding
Chr.CHR_HG2419_PATCH: 144423863 - 144428547