Assay name
HS_SSX2IP_1863715 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for SSX2IP
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
SSX2IP
Gene aliases
hMsd1
Species
Homo sapiens
Main target
ENST00000490476
Exons numbers
1-2
Ensembl exons ids
ENSE00001933654;ENSE00001953744
Amplicon start
473
Amplicon length
97
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000342203
Protein coding
CCDS699
NM_001166293;NM_014021;NM_001166417
Chr.1: 84643707 - 84690545
ENST00000437941
Protein coding
CCDS53337
NM_001166294;NM_001166295
Chr.1: 84643707 - 84690468
ENST00000476905
Nonsense mediated decay
Chr.1: 84647341 - 84690757
ENST00000481102
Nonsense mediated decay
Chr.1: 84647339 - 84690304
ENST00000490476
Retained intron
Chr.1: 84650371 - 84652441
ENST00000603677
Protein coding
Chr.1: 84649630 - 84690289
ENST00000605755
Protein coding
CCDS53337
Chr.1: 84647376 - 84690444