Assay name
MM_MSH3_2284150 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Msh3
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Msh3
Species
Mus musculus
Main target
ENSMUST00000185852
Exons numbers
4-5
Ensembl exons ids
ENSMUSE00000226890;ENSMUSE00001328585
Amplicon start
721
Amplicon length
84
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000022220
Protein coding
CCDS79222
NM_001311120
Chr.13: 92211886 - 92355003
ENSMUST00000185852
Protein coding
CCDS49326
NM_010829
Chr.13: 92211872 - 92354995
ENSMUST00000186878
Retained intron
Chr.13: 92345869 - 92354953
ENSMUST00000187831
Processed transcript
Chr.13: 92340672 - 92354515
ENSMUST00000190393
Nonsense mediated decay
Chr.13: 92346520 - 92354985
ENSMUST00000191509
Nonsense mediated decay
Chr.13: 92309180 - 92354996
ENSMUST00000191550
Nonsense mediated decay
Chr.13: 92211882 - 92354999