Assay name
RN_SMARCE1_2356368 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Smarce1
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Smarce1
Species
Rattus norvegicus
Main target
ENSRNOT00000086103
Exons numbers
7-8
Ensembl exons ids
ENSRNOE00000555635;ENSRNOE00000571794
Amplicon start
705
Amplicon length
68
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSRNOT00000014230
Protein coding
NM_001024993
Chr.10: 87117887 - 87136026
ENSRNOT00000080836
Processed transcript
Chr.10: 87117888 - 87137965
ENSRNOT00000083233
Protein coding
Chr.10: 87116835 - 87136072
ENSRNOT00000086103
Processed transcript
Chr.10: 87116827 - 87136072
ENSRNOT00000089629
Retained intron
Chr.10: 87120676 - 87122195