Assay name
HS_GPS1_1246536 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for GPS1
Best transcript assay for ENST00000580716
Assay targets 22 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Best transcript assay for ENST00000580716
Assay targets 22 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Gene symbol
GPS1
Gene aliases
COPS1;CSN1
Species
Homo sapiens
Main target
ENST00000580716
Exons numbers
3
Ensembl exons ids
ENSE00003464267
Amplicon start
197
Amplicon length
84
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000306823
Protein coding
CCDS32774
NM_001321089;NM_004127
Chr.17: 82051909 - 82057470
ENST00000320548
Protein coding
CCDS82228
NM_001321093
Chr.17: 82051875 - 82057470
ENST00000392357
Retained intron
Chr.17: 82052570 - 82057470
ENST00000392358
Protein coding
CCDS11800
NM_212492
Chr.17: 82051958 - 82057470
ENST00000578392
Nonsense mediated decay
Chr.17: 82051908 - 82054542
ENST00000578552
Protein coding
CCDS82226
NM_001321090;NM_001321092
Chr.17: 82051865 - 82057470
ENST00000580141
Nonsense mediated decay
Chr.17: 82051901 - 82056019
ENST00000580627
Nonsense mediated decay
Chr.17: 82051902 - 82054682
ENST00000580716
Protein coding
Chr.17: 82051477 - 82054741
ENST00000580723
Nonsense mediated decay
Chr.17: 82051927 - 82054738
ENST00000581418
Protein coding
Chr.17: 82051901 - 82054668
ENST00000581578
Protein coding
Chr.17: 82051897 - 82054542
ENST00000582327
Protein coding
Chr.17: 82050948 - 82054651
ENST00000583009
Protein coding
Chr.17: 82052233 - 82054569
ENST00000583641
Protein coding
Chr.17: 82051897 - 82054757
ENST00000583885
Protein coding
Chr.17: 82051897 - 82054559
ENST00000583961
Protein coding
Chr.17: 82051500 - 82054586
ENST00000584460
Nonsense mediated decay
Chr.17: 82051929 - 82057463
ENST00000585084
Protein coding
Chr.17: 82051175 - 82054968
ENST00000623691
Protein coding
CCDS82227
NM_001330539;NM_001321091
Chr.17: 82051897 - 82057470
ENST00000623761
Protein coding
Chr.17: 82052242 - 82057424
ENST00000624957
Protein coding
CCDS82225
NM_001330541
Chr.17: 82051893 - 82057440