Assay name
HS_SPTLC1_1251045 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for SPTLC1
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
SPTLC1
Gene aliases
LCB1;SPTI;HSAN1;hLCB1;HSN1
Species
Homo sapiens
Main target
ENST00000477888
Exons numbers
1-3
Ensembl exons ids
ENSE00001853490;ENSE00003490017;ENSE00001954565
Amplicon start
10
Amplicon length
148
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000262554
Protein coding
CCDS6692
NM_001281303;NM_006415
Chr.9: 92031147 - 92115413
ENST00000337841
Protein coding
CCDS6693
NM_178324
Chr.9: 92079061 - 92115383
ENST00000477888
Processed transcript
Chr.9: 92079853 - 92108768
ENST00000482632
Processed transcript
Chr.9: 92059179 - 92115384
ENST00000644140
Nonsense mediated decay
Chr.9: 92031272 - 92115374
ENST00000646534
Nonsense mediated decay
Chr.9: 92031146 - 92115373