Assay name​
HS_CLCN2_1358932 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for CLCN2
Assay targets 16 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 16 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
CLCN2
Gene aliases​
CLC2;EJM6;ClC-2
Species​
Homo sapiens
Main target​
ENST00000638134
Exons numbers​
7-8
Ensembl exons ids​
ENSE00001925231;ENSE00003792871
Amplicon start​
735
Amplicon length​
71
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000265593
Protein coding
CCDS3263
NM_004366
Chr.3: 184346185 - 184361605
ENST00000344937
Protein coding
CCDS54691
NM_001171087
Chr.3: 184346188 - 184361602
ENST00000434054
Protein coding
CCDS54690
NM_001171088
Chr.3: 184346398 - 184361603
ENST00000457512
Protein coding
CCDS54692
NM_001171089
Chr.3: 184346520 - 184361603
ENST00000475279
Nonsense mediated decay
Chr.3: 184354266 - 184358049
ENST00000485667
Retained intron
Chr.3: 184355055 - 184361486
ENST00000636180
Nonsense mediated decay
Chr.3: 184346199 - 184361629
ENST00000636241
Nonsense mediated decay
Chr.3: 184353322 - 184361448
ENST00000636492
Protein coding
Chr.3: 184354310 - 184359107
ENST00000636658
Nonsense mediated decay
Chr.3: 184354583 - 184357696
ENST00000636661
Nonsense mediated decay
Chr.3: 184346273 - 184361650
ENST00000636860
Processed transcript
Chr.3: 184355911 - 184357687
ENST00000637392
Retained intron
Chr.3: 184346230 - 184361455
ENST00000637538
Nonsense mediated decay
Chr.3: 184352294 - 184357697
ENST00000637909
Nonsense mediated decay
Chr.3: 184346199 - 184358741
ENST00000638134
Nonsense mediated decay
Chr.3: 184353368 - 184361444