Assay name
HS_RAPGEF6_1391798 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for RAPGEF6
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
RAPGEF6
Gene aliases
RA-GEF-2;PDZ-GEF2;PDZGEF2
Species
Homo sapiens
Main target
ENST00000514179
Exons numbers
5-6
Ensembl exons ids
ENSE00003527432;ENSE00002079088
Amplicon start
358
Amplicon length
111
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000296859
Protein coding
CCDS54900
NM_001164386
Chr.5: 131426559 - 131635111
ENST00000308008
Protein coding
CCDS54898
NM_001164389
Chr.5: 131435951 - 131635030
ENST00000504039
Protein coding
Chr.5: 131508123 - 131532247
ENST00000504575
Protein coding
Chr.5: 131508105 - 131533006
ENST00000507093
Protein coding
CCDS54901
NM_001164387
Chr.5: 131426236 - 131635212
ENST00000509018
Protein coding
CCDS34225
NM_016340
Chr.5: 131423921 - 131635236
ENST00000510071
Protein coding
CCDS54897
NM_001164390
Chr.5: 131463615 - 131635231
ENST00000513227
Protein coding
Chr.5: 131505482 - 131533033
ENST00000514179
Retained intron
Chr.5: 131472090 - 131533006
ENST00000515170
Nonsense mediated decay
Chr.5: 131436290 - 131635213
ENST00000627212
Protein coding
CCDS54899
NM_001164388
Chr.5: 131427216 - 131635159