Assay name
HS_COL11A1_1495479 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for COL11A1
Best transcript assay for ENST00000358392
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000358392
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
COL11A1
Gene aliases
STL2;CO11A1;COLL6;DFNA37
Species
Homo sapiens
Main target
ENST00000358392
Exons numbers
1-2
Ensembl exons ids
ENSE00001451762;ENSE00000779592
Amplicon start
404
Amplicon length
143
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000353414
Protein coding
CCDS53348
NM_001190709
Chr.1: 102876468 - 103108496
ENST00000358392
Protein coding
NM_080629
Chr.1: 102876467 - 103108496
ENST00000370096
Protein coding
CCDS778
NM_001854
Chr.1: 102876473 - 103108522
ENST00000427239
Protein coding
Chr.1: 103008473 - 103108178
ENST00000461720
Protein coding
Chr.1: 103001014 - 103108485
ENST00000512756
Protein coding
CCDS780
NM_080630
Chr.1: 102877951 - 103108479
ENST00000644186
Protein coding
Chr.1: 103001260 - 103108522
ENST00000645458
Protein coding
Chr.1: 103001079 - 103108872
ENST00000647280
Protein coding
Chr.1: 103001260 - 103108522