Assay name
HS_RFX5_1538970 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for RFX5
Assay targets 18 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 18 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
RFX5
Species
Homo sapiens
Main target
ENST00000458484
Exons numbers
2-4
Ensembl exons ids
ENSE00000959765;ENSE00003785278;ENSE00003647996
Amplicon start
117
Amplicon length
114
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000290524
Protein coding
CCDS994
NM_001025603;NM_000449
Chr.1: 151340640 - 151347251
ENST00000368870
Protein coding
CCDS994
Chr.1: 151341829 - 151347326
ENST00000392746
Protein coding
Chr.1: 151342247 - 151346822
ENST00000412774
Protein coding
Chr.1: 151344728 - 151347228
ENST00000421986
Nonsense mediated decay
Chr.1: 151344515 - 151347206
ENST00000422595
Protein coding
Chr.1: 151343749 - 151347021
ENST00000430227
Protein coding
Chr.1: 151344521 - 151347228
ENST00000435314
Nonsense mediated decay
Chr.1: 151344560 - 151346818
ENST00000436271
Protein coding
Chr.1: 151344792 - 151346872
ENST00000437327
Protein coding
Chr.1: 151344764 - 151347292
ENST00000444392
Nonsense mediated decay
Chr.1: 151345122 - 151347293
ENST00000450506
Protein coding
Chr.1: 151344199 - 151346973
ENST00000452456
Nonsense mediated decay
Chr.1: 151345142 - 151346835
ENST00000452671
Protein coding
CCDS994
Chr.1: 151341960 - 151347357
ENST00000458484
Protein coding
Chr.1: 151344256 - 151346606
ENST00000478564
Processed transcript
Chr.1: 151344577 - 151347241
ENST00000479681
Retained intron
Chr.1: 151344989 - 151346856
ENST00000494217
Retained intron
Chr.1: 151344962 - 151347294