Assay name
HS_TPP1_1546553 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for TPP1
Assay targets 17 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 17 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
TPP1
Gene aliases
LPIC;TPP-1;CLN2;SCAR7
Species
Homo sapiens
Main target
ENST00000428886
Exons numbers
2-3
Ensembl exons ids
ENSE00003475316;ENSE00003600767
Amplicon start
248
Amplicon length
94
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000299427
Protein coding
CCDS7770
NM_000391
Chr.11: 6612768 - 6619422
ENST00000428886
Retained intron
Chr.11: 6617062 - 6619372
ENST00000528917
Retained intron
Chr.11: 6617748 - 6619421
ENST00000530040
Processed transcript
Chr.11: 6616423 - 6619429
ENST00000533371
Protein coding
Chr.11: 6612772 - 6619396
ENST00000534644
Processed transcript
Chr.11: 6616975 - 6619401
ENST00000642892
Protein coding
Chr.11: 6612784 - 6619353
ENST00000643479
Retained intron
Chr.11: 6612784 - 6619429
ENST00000643516
Protein coding
Chr.11: 6612832 - 6618891
ENST00000644218
Protein coding
Chr.11: 6612786 - 6619429
ENST00000644683
Nonsense mediated decay
Chr.11: 6612876 - 6619429
ENST00000644831
Retained intron
Chr.11: 6612794 - 6619429
ENST00000644933
Nonsense mediated decay
Chr.11: 6612912 - 6619381
ENST00000645331
Retained intron
Chr.11: 6612794 - 6619422
ENST00000645620
Protein coding
Chr.11: 6612801 - 6619369
ENST00000646777
Retained intron
Chr.11: 6612784 - 6619429
ENST00000647209
Nonsense mediated decay
Chr.11: 6613033 - 6619413