Assay name​
HS_PRDM2_1583327 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for PRDM2
Best transcript assay for ENST00000491815
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000491815
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
PRDM2
Gene aliases​
RIZ;RIZ1;RIZ2;KMT8;MTB-ZF;HUMHOXY1;KMT8A
Species​
Homo sapiens
Main target​
ENST00000491815
Exons numbers​
1-2
Ensembl exons ids​
ENSE00001844038;ENSE00001937971
Amplicon start​
50
Amplicon length​
78
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000235372
Protein coding
CCDS150
NM_012231
Chr.1: 13704855 - 13825079
ENST00000311066
Protein coding
CCDS151
NM_015866
Chr.1: 13704855 - 13788059
ENST00000343137
Protein coding
CCDS30603
Chr.1: 13749415 - 13787657
ENST00000407521
Protein coding
Chr.1: 13749436 - 13778632
ENST00000413440
Protein coding
CCDS30603
NM_001007257
Chr.1: 13749403 - 13788079
ENST00000491134
Nonsense mediated decay
Chr.1: 13731018 - 13787067
ENST00000491815
Retained intron
Chr.1: 13749424 - 13773671
ENST00000502727
Processed transcript
Chr.1: 13738750 - 13773188
ENST00000503842
Protein coding
Chr.1: 13749435 - 13823499
ENST00000505823
Protein coding
Chr.1: 13749436 - 13823419